Plots

## Score analysis:  detPPV

## Score analysis:  FP.atFDR05

## Score analysis:  log10QDiff

## Score analysis:  TP.atFDR05

scores over the datasets

## $miR.122
## original       20       35       50 
##    0.732    0.732    0.732    0.732 
## 
## $miR.133
## original       20       35       50 
##    0.733    0.733    0.733    0.733 
## 
## $miR.138
## original       20       35       50 
##    0.694    0.730    0.700    0.696 
## 
## $miR.145
## original       20       35       50 
##    0.686    0.686    0.686    0.650 
## 
## $miR.184
## original       20       35       50 
##    0.600    0.598    0.600    0.598 
## 
## $miR.190a
## original       20       35       50 
##    0.732    0.732    0.702    0.732 
## 
## $miR.200b
## original       20       35       50 
##    0.752    0.745    0.752    0.739 
## 
## $miR.216a
## original       20       35       50 
##    0.628    0.633    0.612    0.561 
## 
## $miR.217
## original       20       35       50 
##    0.698    0.699    0.696    0.698 
## 
## $miR.219a
## original       20       35       50 
##    0.732    0.732    0.732    0.732 
## 
## $miR.375
## original       20       35       50 
##    0.707    0.707    0.707    0.707 
## 
## $miR.451a
## original       20       35       50 
##    0.687    0.687    0.672    0.709

scores over methods

## $aREAmir
## original       20       35       50 
##    0.958    0.958    0.958    0.958 
## 
## $aREAmir2
## original       20       35       50 
##    0.958    0.958    0.958    0.958 
## 
## $EN.up
## original       20       35       50 
##    0.006    0.006    0.006    0.006 
## 
## $EN.down
## original       20       35       50 
##        1        1        1        1 
## 
## $wEN.up
## original       20       35       50 
##    0.005    0.005    0.005    0.005 
## 
## $wEN.down
## original       20       35       50 
##        1        1        1        1 
## 
## $michael.up
## original       20       35       50 
##    0.005    0.005    0.005    0.005 
## 
## $michael.down
## original       20       35       50 
##        1        1        1        1 
## 
## $MW
## original       20       35       50 
##    0.876    0.876    0.876    0.918 
## 
## $KS
## original       20       35       50 
##    0.753    0.753    0.726    0.753 
## 
## $KS2
## original       20       35       50 
##    1.000    1.000    1.000    0.958 
## 
## $GSEA
## original       20       35       50 
##    0.584    0.662    0.551    0.527 
## 
## $modSites
## original       20       35       50 
##        1        1        1        1 
## 
## $modScore
## original       20       35       50 
##        1        1        1        1 
## 
## $regmir.down
## original       20       35       50 
##    0.201    0.179    0.198    0.169 
## 
## $regmir.up
## original       20       35       50 
##    0.009    0.009    0.009    0.009 
## 
## $regmirb.down
## original       20       35       50 
##        1        1        1        1 
## 
## $regmirb.up
## original       20       35       50 
##     0.01     0.01     0.01     0.01 
## 
## $combFish.1
## original       20       35       50 
##        1        1        1        1 
## 
## $combGeom.1
## original       20       35       50 
##        1        1        1        1 
## 
## $combFish.2
## original       20       35       50 
##    1.000    1.000    0.958    0.958 
## 
## $combGeom.2
## original       20       35       50 
##    1.000    1.000    1.000    0.958

TP ratio at FDR 0.05 over methods

## $aREAmir
## original       20       35       50 
##    0.917    0.917    0.917    0.917 
## 
## $aREAmir2
## original       20       35       50 
##    0.917    0.917    0.917    0.917 
## 
## $EN.up
## original       20       35       50 
##        0        0        0        0 
## 
## $EN.down
## original       20       35       50 
##        1        1        1        1 
## 
## $wEN.up
## original       20       35       50 
##        0        0        0        0 
## 
## $wEN.down
## original       20       35       50 
##        1        1        1        1 
## 
## $michael.up
## original       20       35       50 
##        0        0        0        0 
## 
## $michael.down
## original       20       35       50 
##        1        1        1        1 
## 
## $MW
## original       20       35       50 
##        1        1        1        1 
## 
## $KS
## original       20       35       50 
##        1        1        1        1 
## 
## $KS2
## original       20       35       50 
##    0.917    0.917    0.917    1.000 
## 
## $GSEA
## original       20       35       50 
##    0.250    0.250    0.333    0.250 
## 
## $modSites
## original       20       35       50 
##        1        1        1        1 
## 
## $modScore
## original       20       35       50 
##        1        1        1        1 
## 
## $regmir.down
## original       20       35       50 
##        0        0        0        0 
## 
## $regmir.up
## original       20       35       50 
##        0        0        0        0 
## 
## $regmirb.down
## original       20       35       50 
##    0.833    0.833    0.833    0.833 
## 
## $regmirb.up
## original       20       35       50 
##        0        0        0        0 
## 
## $combFish.1
## original       20       35       50 
##        1        1        1        1 
## 
## $combGeom.1
## original       20       35       50 
##        1        1        1        1 
## 
## $combFish.2
## original       20       35       50 
##        1        1        1        1 
## 
## $combGeom.2
## original       20       35       50 
##        1        1        1        1